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All Samples(4)  |  Call(2)  |  Derive(0)  |  Import(2)

src/c/o/cogent-1.5.3/cogent/parse/meme.py   cogent(Download)
from cogent.parse.record_finder import LabeledRecordFinder
from cogent.parse.record import DelimitedSplitter
from cogent.motif.util import Location, ModuleInstance, Module, Motif,\
     MotifResults, make_remap_dict
from cogent.core.moltype import DNA, RNA, PROTEIN
        seq_names = summary_dict['CombinedP'].keys()
        if allowed_ids:
            remap_dict,warning = make_remap_dict(seq_names,allowed_ids)
            if warning:
                warnings.append(warning)

src/p/y/pycogent-HEAD/cogent/parse/meme.py   pycogent(Download)
from cogent.parse.record_finder import LabeledRecordFinder
from cogent.parse.record import DelimitedSplitter
from cogent.motif.util import Location, ModuleInstance, Module, Motif,\
     MotifResults, make_remap_dict
from cogent.core.moltype import DNA, RNA, PROTEIN
        seq_names = summary_dict['CombinedP'].keys()
        if allowed_ids:
            remap_dict,warning = make_remap_dict(seq_names,allowed_ids)
            if warning:
                warnings.append(warning)