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src/q/i/qiime-1.8.0/qiime/denoiser/preprocess.py   qiime(Download)
from cogent.parse.fasta import MinimalFastaParser
from qiime.util import get_tmp_filename
from cogent.parse.flowgram import Flowgram, build_averaged_flowgram
from cogent.parse.flowgram_parser import lazy_parse_sff_handle
 
                #we gathered all sampled flowgrams for this cluster,
                #now average
                ave_flowgram = build_averaged_flowgram(flows[key])
                ave_f = Flowgram(ave_flowgram, Name=key)
 

src/p/y/pycogent-HEAD/tests/test_parse/test_flowgram.py   pycogent(Download)
 
from cogent.core.sequence import Sequence
from cogent.parse.flowgram import Flowgram, build_averaged_flowgram
 
from cogent.parse.flowgram_parser import parse_sff

src/c/o/cogent-1.5.3/tests/test_parse/test_flowgram.py   cogent(Download)
 
from cogent.core.sequence import Sequence
from cogent.parse.flowgram import Flowgram, build_averaged_flowgram
 
from cogent.parse.flowgram_parser import parse_sff