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src/p/y/pycogent-HEAD/tests/test_parse/test_genbank.py   pycogent(Download)
#!/usr/bin/env python
"""Unit tests for the GenBank database parsers.
"""
from cogent.parse.genbank import parse_locus, parse_single_line, \
    indent_splitter, parse_sequence, block_consolidator, parse_organism, \
        filename = argv[2]
        lines = open(filename)
        for i in indent_splitter(lines):
            print '******'
            print i[0]
            for j in indent_splitter(i[1:]):

src/c/o/cogent-1.5.3/tests/test_parse/test_genbank.py   cogent(Download)
#!/usr/bin/env python
"""Unit tests for the GenBank database parsers.
"""
from cogent.parse.genbank import parse_locus, parse_single_line, \
    indent_splitter, parse_sequence, block_consolidator, parse_organism, \
        filename = argv[2]
        lines = open(filename)
        for i in indent_splitter(lines):
            print '******'
            print i[0]
            for j in indent_splitter(i[1:]):