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src/p/y/pycogent-HEAD/tests/test_parse/test_hmmscan.py   pycogent(Download)
#!/usr/bin/env python
 
"""For use with hmmer3"""
 
from cogent.parse.hmmscan import MinimalTbloutParser, RichTbloutParser
        exp3 = dict([(h,t(e)) for h,t,e in zip(headers,types,expbase3)])
 
        parser = RichTbloutParser(tblout)
        self.assertEqual(parser.next(), exp1)
        self.assertEqual(parser.next(), exp2)