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src/c/o/cogent-1.5.3/tests/test_parse/test_rnaview.py   cogent(Download)
 
from cogent.util.unit_test import TestCase, main
from cogent.parse.rnaview import is_roman_numeral, is_edge, is_orientation,\
    parse_annotation, parse_uncommon_residues, parse_base_pairs,\
    parse_base_multiplets, parse_pair_counts, MinimalRnaviewParser,\
            Base('0','285','A','274'), Base('0','367','G','356')])
        bms = BaseMultiplets([bm1,bm2])
        obs = parse_base_multiplets(basic_lines)
        for o,e in zip(obs,bms):
            for base_x, base_y in zip(o,e):
            Base('0','285','a','274'), Base('0','367','G','356')])
        bms = BaseMultiplets([bm1,bm2])
        obs = parse_base_multiplets(basic_lines)
        for o,e in zip(obs,bms):
            for base_x, base_y in zip(o,e):

src/p/y/pycogent-HEAD/tests/test_parse/test_rnaview.py   pycogent(Download)
 
from cogent.util.unit_test import TestCase, main
from cogent.parse.rnaview import is_roman_numeral, is_edge, is_orientation,\
    parse_annotation, parse_uncommon_residues, parse_base_pairs,\
    parse_base_multiplets, parse_pair_counts, MinimalRnaviewParser,\
            Base('0','285','A','274'), Base('0','367','G','356')])
        bms = BaseMultiplets([bm1,bm2])
        obs = parse_base_multiplets(basic_lines)
        for o,e in zip(obs,bms):
            for base_x, base_y in zip(o,e):
            Base('0','285','a','274'), Base('0','367','G','356')])
        bms = BaseMultiplets([bm1,bm2])
        obs = parse_base_multiplets(basic_lines)
        for o,e in zip(obs,bms):
            for base_x, base_y in zip(o,e):