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src/c/o/CombiVEP-0.1.2/combivep/preproc/reader.py   CombiVEP(Download)
    def fetch_hash_snps(self, chromosome, start_pos, end_pos):
        for rec in self.fetch_array_snps(chromosome, start_pos, end_pos):
            if len(rec) != combivep_settings.LJB_PARSED_EXPECTED_LENGTH :
                raise Exception("Invalid formatting is found in file '%s'>> Chrom : %s\tpos : %s" % (self.db_file_name, rec[combivep_settings.LJB_PARSED_0_INDEX_CHROM], rec[combivep_settings.LJB_PARSED_0_INDEX_POS]))
            snp_info = {combivep_settings.KEY_LJB_CHROM : rec[combivep_settings.LJB_PARSED_0_INDEX_CHROM],

src/c/o/CombiVEP-0.1.2/combivep/refdb/control.py   CombiVEP(Download)
    def __tabix(self, file_name):
        """ tabix into gz and tbi file """
        return pysam.tabix_index(file_name,
                                 force     = True,
                                 seq_col   = combivep_settings.LJB_PARSED_0_INDEX_CHROM,