Did I find the right examples for you? yes no

All Samples(2)  |  Call(0)  |  Derive(0)  |  Import(2)

src/b/i/bioscons-0.6/bioscons/pplacer.py   bioscons(Download)
 
from fileutils import rename
from infernal import cmalign_method, cmmerge_method, CMALIGN_FLAGS
 
def pplacer(env, refpkg, alignment, outdir = None, options = None, nproc = 2, pplacer_binary = 'pplacer'):
        env.AddMethod(pplacer, 'pplacer_method')
 
    cmalign_options = cmalign_options or CMALIGN_FLAGS
 
    pkg = Refpkg(refpkg, create=False)

src/b/i/bioscons-HEAD/bioscons/pplacer.py   bioscons(Download)
 
from fileutils import rename
from infernal import cmalign_method, cmmerge_method, CMALIGN_FLAGS
 
def pplacer(env, refpkg, alignment, outdir = None, options = None, nproc = 2, pplacer_binary = 'pplacer'):
        env.AddMethod(pplacer, 'pplacer_method')
 
    cmalign_options = cmalign_options or CMALIGN_FLAGS
 
    pkg = Refpkg(refpkg, create=False)