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src/c/o/cogent-1.5.3/cogent/align/algorithm.py   cogent(Download)
        aln1, aln2 = self.FirstAlign, self.SecondAlign
        if not aln1 or not aln2:
            self.fill()
            self.traceback()
            aln1, aln2 = self.FirstAlign, self.SecondAlign

src/p/y/pycogent-HEAD/cogent/align/algorithm.py   pycogent(Download)
        aln1, aln2 = self.FirstAlign, self.SecondAlign
        if not aln1 or not aln2:
            self.fill()
            self.traceback()
            aln1, aln2 = self.FirstAlign, self.SecondAlign