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src/m/s/msmbuilder-2.8.2/MSMBuilder/cfep.py   msmbuilder(Download)
import matplotlib.pyplot as plt
 
import mdtraj as md
from msmbuilder import MSMLib
from msmbuilder import tpt
def test():
    from scipy import io
    import mdtraj
 
    print("Testing cfep code....")

src/m/s/msmbuilder-2.8.2/MSMBuilder/project/validators.py   msmbuilder(Download)
import numpy as np
from msmbuilder.metrics import RMSD
import mdtraj as md
 
 

src/m/s/msmbuilder-2.8.2/MSMBuilder/project/utils.py   msmbuilder(Download)
from msmbuilder.utils import keynat
import tables
import mdtraj as md
 
from .project import Project

src/m/s/msmbuilder-2.8.2/MSMBuilder/project/reference_data.py   msmbuilder(Download)
import numpy as np
 
import mdtraj as md
from mdtraj.utils.six import iteritems
import logging

src/m/s/msmbuilder-2.8.2/MSMBuilder/project/project.py   msmbuilder(Download)
 
from msmbuilder import MSMLib
import mdtraj as md
from mdtraj import io
import logging

src/m/s/msmbuilder-2.8.2/MSMBuilder/project/builder.py   msmbuilder(Download)
from msmbuilder.utils import keynat
import numpy as np
import mdtraj as md
 
from .project import Project

src/m/s/msmbuilder-2.8.2/MSMBuilder/metrics/rmsd.py   msmbuilder(Download)
import numpy as np
from collections import namedtuple
import mdtraj as md
 
from .baseclasses import AbstractDistanceMetric

src/m/s/msmbuilder-2.8.2/MSMBuilder/metrics/positions.py   msmbuilder(Download)
import logging
logger = logging.getLogger(__name__)
import mdtraj as md
import numpy as np
try:

src/m/s/msmbuilder-2.8.2/MSMBuilder/metrics/parsers.py   msmbuilder(Download)
import pickle
import numpy as np
import mdtraj as md
from pkg_resources import iter_entry_points
from msmbuilder.reduce import tICA

src/m/s/msmbuilder-2.8.2/MSMBuilder/metrics/contact.py   msmbuilder(Download)
import itertools
from numbers import Number
import mdtraj as md
 
from .baseclasses import Vectorized, AbstractDistanceMetric

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