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src/s/e/seal-0.4.0-rc2/tests/seal/lib/aligner/bwa/test_bwa_memory.py   seal(Download)
  l = len(pairs)
  print_meminfo("AFTER INIT OPT & II")
  bwa.cal_sa_reg_gap(0, bwts, l, bwsa[0], gopt)
  bwa.cal_sa_reg_gap(0, bwts, l, bwsa[1], gopt)
  print_meminfo("AFTER CAL_SA_REG_GAP")

src/s/e/seal-0.4.0-rc2/tests/seal/lib/aligner/bwa/try_bwa_pairs.py   seal(Download)
      break
    bwsa = bwa.build_bws_array(pairs)
    bwa.cal_sa_reg_gap(0, bwts, seq_pairs_read, bwsa[0], gopt)
    bwa.cal_sa_reg_gap(0, bwts, seq_pairs_read, bwsa[1], gopt)
    cnt_chg = bwa.cal_pac_pos_pe(bwts, seq_pairs_read, bwsa,

src/s/e/seal-0.4.0-rc2/tests/seal/lib/aligner/bwa/test_seq_list_len.py   seal(Download)
    resident_list.append(resident)
 
    bwa.cal_sa_reg_gap(0, bwts, l, bwsa[0], gopt)
    bwa.cal_sa_reg_gap(0, bwts, l, bwsa[1], gopt)
    size, resident = print_meminfo("AFTER CAL_SA_REG_GAP")