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src/s/e/seal-0.4.0-rc2/tests/seal/lib/aligner/bwa/testing_utilities.py   seal(Download)
  for i in xrange(len(hit['cigar'])):
    size, op = hit['cigar'][i]
    encoded_v = (op << bwa_const.CIGAR_OP_SHIFT) | (size & bwa_const.CIGAR_LN_MASK)
    struct.cigar[i] = ct.c_uint16(encoded_v)