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src/s/e/seal-0.4.0-rc2/tests/seal/lib/aligner/bwa/test_bwa_memory.py   seal(Download)
  bwsa = bwa.build_bws_array(pairs)
  print_meminfo("AFTER BUILDING BWSA")
  bwts = bwa.restore_index(refseq_fname)
  print_meminfo("AFTER RESTORING INDEX")
  bnsp, pacseq = bwa.restore_reference(refseq_fname)
  bwsa = bwa.build_bws_array(pairs)
  print_meminfo("AFTER BUILDING BWSA")
  bwts = bwa.restore_index(refseq_fname)
  print_meminfo("AFTER RESTORING INDEX")
  bnsp, pacseq = bwa.restore_reference(refseq_fname)

src/s/e/seal-0.4.0-rc2/tests/seal/lib/aligner/bwa/test_seq_list_len.py   seal(Download)
    resident_list.append(resident)
 
    bwts = bwa.restore_index(refseq_fname)
    size, resident = print_meminfo("AFTER RESTORING INDEX")
    size_list.append(size)

src/s/e/seal-0.4.0-rc2/tests/seal/lib/aligner/bwa/try_bwa_pairs.py   seal(Download)
  root_name = 'refseq'
  generate_ref(root_name)
  bwts = bwa.restore_index(root_name)
  bnsp, pacseq = bwa.restore_reference(root_name)
  sys.stderr.write(str(bnsp[0]))

src/s/e/seal-0.4.0-rc2/tests/seal/lib/aligner/bwa/try_bwa_iterator.py   seal(Download)
    if len(pairs) == 0:
      break
    bwts = bwa.restore_index(refseq_fname)
    bnsp, pacseq = bwa.restore_reference(refseq_fname)
 

src/s/e/seal-0.4.0-rc2/tests/seal/lib/aligner/bwa/try_itermulti.py   seal(Download)
  pairs_flow = it.izip(read_flow, mate_flow)
  pairs = list(it.islice(pairs_flow, 0, seq_list_len))
  bwts = bwa.restore_index(refseq_fname)
  bnsp, pacseq = bwa.restore_reference(refseq_fname)