ProDy

HomePage: http://www.csb.pitt.edu/ProDy

Author: Ahmet Bakan

Download: https://pypi.python.org/packages/source/P/ProDy/ProDy-1.5.1.tar.gz

        .. image:: https://secure.travis-ci.org/prody/ProDy.png?branch=master
   :target: http://travis-ci.org/#!/prody/ProDy

.. image:: https://pypip.in/v/ProDy/badge.png
   :target: https://pypi.python.org/pypi/ProDy

.. image:: https://pypip.in/d/ProDy/badge.png
   :target: https://crate.io/packages/ProDy/

SYNOPSIS
--------

ProDy is a free and open-source Python package for protein structure, dynamics,
and sequence analysis.  It allows for comparative analysis and modeling of
protein structural dynamics and sequence co-evolution.  Fast and flexible ProDy
API is for interactive usage as well as application development.  ProDy also
comes with several analysis applications and a graphical user interface for
visual analysis.


GETTING PRODY
-------------

You can run ProDy on all major platforms.  For download and installation
instructions see:

* http://prody.csb.pitt.edu/downloads


DOCUMENTATION
-------------

* Homepage: http://prody.csb.pitt.edu/

* Tutorials: http://prody.csb.pitt.edu/tutorials

* Reference: http://prody.csb.pitt.edu/manual

* Applications: http://prody.csb.pitt.edu/manual/apps

* NMWiz GUI: http://prody.csb.pitt.edu/nmwiz

* Changes: http://prody.csb.pitt.edu/manual/release


SOURCE CODE
-----------

* Source code: https://github.com/prody/ProDy

* Issue tracker: https://github.com/prody/ProDy/issues


LICENSE
-------

ProDy is available under MIT License. See LICENSE.txt for more details.

Biopython (http://biopython.org/) KDTree and pairwise2 modules are distributed
with ProDy. Biopython is developed by The Biopython Consortium and is available
under the Biopython license (http://www.biopython.org/DIST/LICENSE).

Pyparsing (http://pyparsing.wikispaces.com/) module is distributed with ProDy.
Pyparsing is developed by Paul T. McGuire and is available under the MIT
license (http://www.opensource.org/licenses/mit-license.php).

Argparse module (http://code.google.com/p/argparse/) is distributed with ProDy.
Argparse is developed by Steven J. Bethard and is available under the Python
Software Foundation License.